BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024F06LP1|AL428248
(1073 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig409 2010 0.0
>3x_Contig409
Length = 2404
Score = 2010 bits (1010), Expect = 0.0
Identities = 1057/1074 (98%), Gaps = 2/1074 (0%)
Strand = Plus / Minus
Query: 1 gatctttagatggtgaacatgtcgttcaattcaatggccatggtaccagtaatgtcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 gatctttagatggtgaacatgtcgttcaattcaatggccatggtaccagtaatgtcactg 1150
Query: 61 ttgtaaaattttctcctatccaggggtctcaatatgttgcttcaggagatgattccggta 120
|||| | |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1149 ttgtgagatttactcatatccaggggtctcaatatattgcttcaggagatgattccggta 1090
Query: 121 gagttatcgtttggtcttggaatcaggacgataagtctggagaaattgagtacaacgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 gagttatcgtttggtcttggaatcaggacgataagtctggagaaattgagtacaacgtta 1030
Query: 181 agtcggaactacatgtgctcgctggtcctgtcgctgatatatcctgggattttgagggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 agtcggaactacatgtgctcgctggtcctgtcgctgatatatcctgggattttgagggta 970
Query: 241 aaagattggctgttgttggtgaaggtcgtgataggtttggtgcgtttgt-ctcttgggac 299
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 969 aaagattggctgttgttggtgaaggtcgtgataggtttggtgcgtttgtgctcttgggac 910
Query: 300 tcgggcaactcgttaggtgaagtctcgggtcactctcaaagagtcaatgcagttcatttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 tcgggcaactcgttaggtgaagtctcgggtcactctcaaagagtcaatgcagttcatttc 850
Query: 360 aagcaaagcagaccaatgagagctttcagtgtcagtgatgatggttctgttgtgttttac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 aagcaaagcagaccaatgagagctttcagtgtcagtgatgatggttctgttgtgttttac 790
Query: 420 cagggtccacctttcaagtttgcaagcagtgatagaacgcatcacggccaaggtaaattc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cagggtccacctttcaagtttgcaagcagtgatagaacgcatcacggccaaggtaaattc 730
Query: 480 gttagagacgtcaagttctctccaggtgcagggaaatatgctgtgtctgtcggtagcgat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gttagagacgtcaagttctctccaggtgcagggaaatatgctgtgtctgtcggtagcgat 670
Query: 540 cgthagatatgttgctttgatggtaagactggtgaatttatcaaatacattgagtctgaa 599
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cgtaagatatgttgctttgatggtaagactggtgaatttatcaaatacattgagtctgaa 610
Query: 600 aaggctccaattggcggtggtttgtttgctgtcgcatggttagacgatggtgaagagtct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaggctccaattggcggtggtttgtttgctgtcgcatggttagacgatggtgaagagtct 550
Query: 660 tctagagttgttaccgtgggtgctgattgcactgcaaggttgtgggatgtgtcgttggat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tctagagttgttaccgtgggtgctgattgcactgcaaggttgtgggatgtgtcgttggat 490
Query: 720 gatccattccaacagtcttggaaattaggtgcagatgtttcgaatcaaattgtcggtgtt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gatccattccaacagtcttggaaattaggtgcagatgtttcgaatcaaattgtcggtgtt 430
Query: 780 gttgtcactaaggataactccatcgtaacattgacgcttgatgggaccttgagcattttg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gttgtcactaaggataactccatcgtaacattgacgcttgatgggaccttgagcattttg 370
Query: 840 tctctaaatgatcataccatcaaattcattcatggtcacaacaaggggattacttctttg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tctctaaatgatcataccatcaaattcattcatggtcacaacaaggggattacttctttg 310
Query: 900 gcggtaaacccattagtgtctgggtcatacgatggtagagttgttacctggtawttcaga 959
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 309 gcggtaaacccattagtgtctgggtcatacgatggtagagttgttacctgg-aattcaga 251
Query: 960 aggtgacgaakaaattkctattagccatgatattcatggkaatctcgtattggccatcga 1019
|||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 250 aggtgacgaagtcaatgctattagccatgatattcatggtaatctcgtattggccatcga 191
Query: 1020 taactctgataacgaggtatcgagtgtttctttkgacgaaacgttgaagaattt 1073
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 190 taactctgataacgaggtatcgagtgtttcttgggacgaaacgttgaagaattt 137
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6228
Number of Sequences: 1807
Number of extensions: 6228
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 1073
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1057
effective length of database: 10,329,639
effective search space: 10918428423
effective search space used: 10918428423
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)